Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp2bQ8BJF9 Gm14140-201ENSMUST00000119999 995 ntBASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp2bQ8BJF9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Chmp2bQ8BJF9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp2bQ8BJF9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms