Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh20Q8BIZ0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Gm18889-201ENSMUST00000174284 929 ntBASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Mir6990-201ENSMUST00000183724 91 ntBASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh20Q8BIZ0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdh20Q8BIZ0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.83□□□□□ -0.19
Pcdh20Q8BIZ0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Pcdh20Q8BIZ0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdh20Q8BIZ0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Gm44335-201ENSMUST00000196879 141 ntBASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Gm44297-201ENSMUST00000198304 141 ntBASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Gm44346-201ENSMUST00000198851 141 ntBASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh20Q8BIZ0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh20Q8BIZ0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms