Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Clrn3Q8BHH8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.27
Clrn3Q8BHH8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Clrn3Q8BHH8 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clrn3Q8BHH8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clrn3Q8BHH8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Clrn3Q8BHH8 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Clrn3Q8BHH8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Gm13365-201ENSMUST00000121188 973 ntBASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Gm14822-201ENSMUST00000122247 291 ntBASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Mir6990-201ENSMUST00000183724 91 ntBASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Clrn3Q8BHH8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Clrn3Q8BHH8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms