Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Usp6nlQ80XC3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Usp6nlQ80XC3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Usp6nlQ80XC3 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.61■□□□□ 0.09
Usp6nlQ80XC3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Usp6nlQ80XC3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Usp6nlQ80XC3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Usp6nlQ80XC3 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.61■□□□□ 0.09
Usp6nlQ80XC3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Gm27839-201ENSMUST00000184242 106 ntBASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Gm43094-201ENSMUST00000196549 921 ntBASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Gm19078-201ENSMUST00000206311 727 ntBASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Gm6007-201ENSMUST00000208170 823 ntBASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Usp6nlQ80XC3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Gm18027-201ENSMUST00000218947 619 ntBASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Usp6nlQ80XC3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Usp6nlQ80XC3 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Usp6nlQ80XC3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Usp6nlQ80XC3 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Usp6nlQ80XC3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Usp6nlQ80XC3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.58■□□□□ 0.09
Usp6nlQ80XC3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Usp6nlQ80XC3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Usp6nlQ80XC3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Usp6nlQ80XC3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Usp6nlQ80XC3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.58■□□□□ 0.08
Usp6nlQ80XC3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Usp6nlQ80XC3 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.58■□□□□ 0.08
Usp6nlQ80XC3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Usp6nlQ80XC3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Usp6nlQ80XC3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Usp6nlQ80XC3 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Usp6nlQ80XC3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Usp6nlQ80XC3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Usp6nlQ80XC3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Usp6nlQ80XC3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms