Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trim62Q80V85 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trim62Q80V85 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.64□□□□□ -0.07
Trim62Q80V85 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.64□□□□□ -0.07
Trim62Q80V85 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.64□□□□□ -0.07
Trim62Q80V85 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trim62Q80V85 Gm27838-201ENSMUST00000184829 128 ntBASIC14.64□□□□□ -0.07
Trim62Q80V85 Gm21470-201ENSMUST00000187680 696 ntBASIC14.64□□□□□ -0.07
Trim62Q80V85 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trim62Q80V85 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.64□□□□□ -0.07
Trim62Q80V85 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trim62Q80V85 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trim62Q80V85 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trim62Q80V85 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trim62Q80V85 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Trim62Q80V85 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trim62Q80V85 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.63□□□□□ -0.07
Trim62Q80V85 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Trim62Q80V85 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.63□□□□□ -0.07
Trim62Q80V85 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.63□□□□□ -0.07
Trim62Q80V85 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.63□□□□□ -0.07
Trim62Q80V85 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trim62Q80V85 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.63□□□□□ -0.07
Trim62Q80V85 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trim62Q80V85 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trim62Q80V85 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim62Q80V85 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim62Q80V85 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim62Q80V85 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Trim62Q80V85 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim62Q80V85 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim62Q80V85 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim62Q80V85 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.62□□□□□ -0.07
Trim62Q80V85 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.62□□□□□ -0.07
Trim62Q80V85 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.62□□□□□ -0.07
Trim62Q80V85 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Trim62Q80V85 Gm20949-201ENSMUST00000206478 952 ntBASIC14.62□□□□□ -0.07
Trim62Q80V85 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.62□□□□□ -0.07
Trim62Q80V85 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.62□□□□□ -0.07
Trim62Q80V85 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim62Q80V85 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trim62Q80V85 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trim62Q80V85 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim62Q80V85 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim62Q80V85 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trim62Q80V85 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trim62Q80V85 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.62□□□□□ -0.07
Trim62Q80V85 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trim62Q80V85 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Trim62Q80V85 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms