Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp8Q80U87 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Usp8Q80U87 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp8Q80U87 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Usp8Q80U87 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp8Q80U87 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp8Q80U87 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.23□□□□□ -0.13
Usp8Q80U87 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp8Q80U87 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp8Q80U87 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp8Q80U87 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Usp8Q80U87 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp8Q80U87 Mir8117-201ENSMUST00000184773 107 ntBASIC14.23□□□□□ -0.13
Usp8Q80U87 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Usp8Q80U87 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Usp8Q80U87 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp8Q80U87 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp8Q80U87 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp8Q80U87 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp8Q80U87 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.23□□□□□ -0.13
Usp8Q80U87 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Usp8Q80U87 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Usp8Q80U87 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Usp8Q80U87 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.23□□□□□ -0.13
Usp8Q80U87 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.23□□□□□ -0.13
Usp8Q80U87 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp8Q80U87 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp8Q80U87 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp8Q80U87 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Usp8Q80U87 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp8Q80U87 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Usp8Q80U87 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp8Q80U87 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Usp8Q80U87 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Usp8Q80U87 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.22□□□□□ -0.13
Usp8Q80U87 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.22□□□□□ -0.13
Usp8Q80U87 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Usp8Q80U87 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp8Q80U87 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp8Q80U87 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.22□□□□□ -0.13
Usp8Q80U87 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp8Q80U87 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.22□□□□□ -0.13
Usp8Q80U87 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp8Q80U87 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Usp8Q80U87 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp8Q80U87 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp8Q80U87 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp8Q80U87 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp8Q80U87 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp8Q80U87 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Usp8Q80U87 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp8Q80U87 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp8Q80U87 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp8Q80U87 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp8Q80U87 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Usp8Q80U87 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Usp8Q80U87 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Usp8Q80U87 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Usp8Q80U87 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp8Q80U87 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Gm45098-201ENSMUST00000207179 657 ntBASIC14.21□□□□□ -0.13
Usp8Q80U87 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.21□□□□□ -0.13
Usp8Q80U87 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.21□□□□□ -0.13
Usp8Q80U87 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Usp8Q80U87 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Usp8Q80U87 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Usp8Q80U87 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.21□□□□□ -0.14
Usp8Q80U87 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Usp8Q80U87 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp8Q80U87 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp8Q80U87 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Usp8Q80U87 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Usp8Q80U87 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp8Q80U87 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp8Q80U87 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Usp8Q80U87 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Usp8Q80U87 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Usp8Q80U87 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Usp8Q80U87 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms