Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ubfd1Q78JW9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Gm11424-201ENSMUST00000121929 829 ntBASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Gm5745-201ENSMUST00000183748 313 ntBASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Gm19220-201ENSMUST00000222682 803 ntBASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Gm15823-201ENSMUST00000064305 670 ntBASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ubfd1Q78JW9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ubfd1Q78JW9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ubfd1Q78JW9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ubfd1Q78JW9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ubfd1Q78JW9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubfd1Q78JW9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubfd1Q78JW9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.76□□□□□ -0.21
Ubfd1Q78JW9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubfd1Q78JW9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubfd1Q78JW9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubfd1Q78JW9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ubfd1Q78JW9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ubfd1Q78JW9 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms