Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.91□□□□□ -0.5
Rif1Q6PR54 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.91□□□□□ -0.5
Rif1Q6PR54 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Gm4986-201ENSMUST00000119731 549 ntBASIC11.91□□□□□ -0.5
Rif1Q6PR54 Gm9083-201ENSMUST00000120423 819 ntBASIC11.91□□□□□ -0.5
Rif1Q6PR54 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.91□□□□□ -0.5
Rif1Q6PR54 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.91□□□□□ -0.5
Rif1Q6PR54 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.91□□□□□ -0.5
Rif1Q6PR54 Gm45186-201ENSMUST00000206874 478 ntBASIC11.91□□□□□ -0.5
Rif1Q6PR54 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.91□□□□□ -0.5
Rif1Q6PR54 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.91□□□□□ -0.5
Rif1Q6PR54 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Gm15635-204ENSMUST00000208024 2539 ntBASIC11.91□□□□□ -0.5
Rif1Q6PR54 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.91□□□□□ -0.5
Rif1Q6PR54 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rif1Q6PR54 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Gm42779-201ENSMUST00000198807 406 ntBASIC11.9□□□□□ -0.5
Rif1Q6PR54 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.9□□□□□ -0.5
Rif1Q6PR54 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Rif1Q6PR54 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Gm11222-201ENSMUST00000119005 738 ntBASIC11.9□□□□□ -0.5
Rif1Q6PR54 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rif1Q6PR54 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rif1Q6PR54 AC121598.2-201ENSMUST00000228376 2325 ntBASIC11.9□□□□□ -0.51
Rif1Q6PR54 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Rif1Q6PR54 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rif1Q6PR54 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.9□□□□□ -0.51
Rif1Q6PR54 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rif1Q6PR54 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.89□□□□□ -0.51
Rif1Q6PR54 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.89□□□□□ -0.51
Rif1Q6PR54 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.89□□□□□ -0.51
Rif1Q6PR54 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rif1Q6PR54 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rif1Q6PR54 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms