Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Gm8213-201ENSMUST00000118191 441 ntBASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Gm27514-201ENSMUST00000183692 110 ntBASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Gm27331-201ENSMUST00000183705 60 ntBASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nup98Q6PFD9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Gm10156-201ENSMUST00000122364 462 ntBASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Gm4271-201ENSMUST00000174444 973 ntBASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Gm29127-201ENSMUST00000188304 517 ntBASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nup98Q6PFD9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Gm9728-201ENSMUST00000200197 1055 ntBASIC16.4■□□□□ 0.22
Nup98Q6PFD9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Gm43118-201ENSMUST00000199149 775 ntBASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Gm10478-201ENSMUST00000084451 396 ntBASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup98Q6PFD9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Nup98Q6PFD9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Nup98Q6PFD9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Gm14350-201ENSMUST00000116642 640 ntBASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup98Q6PFD9 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms