Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Gm6983-201ENSMUST00000214912 628 ntBASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Gm10012-201ENSMUST00000078252 192 ntBASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Gm15371-201ENSMUST00000117057 784 ntBASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Gm24420-201ENSMUST00000176676 59 ntBASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Gm40466-201ENSMUST00000212174 422 ntBASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Gm9257-201ENSMUST00000221254 232 ntBASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snrnp40Q6PE01 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Snrnp40Q6PE01 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.4□□□□□ -0.43
Snrnp40Q6PE01 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Snrnp40Q6PE01 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Snrnp40Q6PE01 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
Snrnp40Q6PE01 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Gm12384-201ENSMUST00000119228 919 ntBASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snrnp40Q6PE01 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms