Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd4Q6PDQ2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chd4Q6PDQ2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd4Q6PDQ2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chd4Q6PDQ2 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chd4Q6PDQ2 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd4Q6PDQ2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Chd4Q6PDQ2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chd4Q6PDQ2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd4Q6PDQ2 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd4Q6PDQ2 Gm42550-201ENSMUST00000201553 960 ntBASIC18.16■□□□□ 0.5
Chd4Q6PDQ2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chd4Q6PDQ2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd4Q6PDQ2 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Chd4Q6PDQ2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chd4Q6PDQ2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd4Q6PDQ2 Gm11661-201ENSMUST00000121761 1327 ntBASIC18.16■□□□□ 0.5
Chd4Q6PDQ2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd4Q6PDQ2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd4Q6PDQ2 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chd4Q6PDQ2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Gm27682-201ENSMUST00000183930 110 ntBASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Gm5187-201ENSMUST00000117317 991 ntBASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Gm29649-201ENSMUST00000185649 419 ntBASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chd4Q6PDQ2 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Chd4Q6PDQ2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC18.14■□□□□ 0.49
Chd4Q6PDQ2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd4Q6PDQ2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Chd4Q6PDQ2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chd4Q6PDQ2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd4Q6PDQ2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd4Q6PDQ2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Chd4Q6PDQ2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd4Q6PDQ2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd4Q6PDQ2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Chd4Q6PDQ2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd4Q6PDQ2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd4Q6PDQ2 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd4Q6PDQ2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd4Q6PDQ2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chd4Q6PDQ2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Itm2b-204ENSMUST00000228637 783 ntBASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Gm27572-201ENSMUST00000183702 255 ntBASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd4Q6PDQ2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd4Q6PDQ2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chd4Q6PDQ2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd4Q6PDQ2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chd4Q6PDQ2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd4Q6PDQ2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chd4Q6PDQ2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd4Q6PDQ2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chd4Q6PDQ2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chd4Q6PDQ2 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Chd4Q6PDQ2 Gm11618-201ENSMUST00000117946 267 ntBASIC18.12■□□□□ 0.49
Chd4Q6PDQ2 Gm5687-201ENSMUST00000118252 640 ntBASIC18.12■□□□□ 0.49
Chd4Q6PDQ2 Gm11400-201ENSMUST00000120853 1214 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms