Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ift88Q61371 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ift88Q61371 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.67■□□□□ 0.1
Ift88Q61371 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ift88Q61371 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.67■□□□□ 0.1
Ift88Q61371 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
Ift88Q61371 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Ift88Q61371 Psmb5-202ENSMUST00000227257 622 ntBASIC15.67■□□□□ 0.1
Ift88Q61371 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ift88Q61371 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ift88Q61371 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ift88Q61371 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ift88Q61371 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ift88Q61371 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Ift88Q61371 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.67■□□□□ 0.1
Ift88Q61371 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ift88Q61371 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ift88Q61371 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ift88Q61371 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ift88Q61371 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
Ift88Q61371 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ift88Q61371 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ift88Q61371 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ift88Q61371 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.66■□□□□ 0.1
Ift88Q61371 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ift88Q61371 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.66■□□□□ 0.1
Ift88Q61371 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ift88Q61371 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Gm44492-201ENSMUST00000197012 141 ntBASIC15.66■□□□□ 0.1
Ift88Q61371 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ift88Q61371 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.66■□□□□ 0.1
Ift88Q61371 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Ift88Q61371 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.66■□□□□ 0.1
Ift88Q61371 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ift88Q61371 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ift88Q61371 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ift88Q61371 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ift88Q61371 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ift88Q61371 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ift88Q61371 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ift88Q61371 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Ift88Q61371 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ift88Q61371 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ift88Q61371 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ift88Q61371 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ift88Q61371 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ift88Q61371 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ift88Q61371 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ift88Q61371 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ift88Q61371 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.65■□□□□ 0.1
Ift88Q61371 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ift88Q61371 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ift88Q61371 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ift88Q61371 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.65■□□□□ 0.1
Ift88Q61371 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.65■□□□□ 0.1
Ift88Q61371 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ift88Q61371 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.65■□□□□ 0.1
Ift88Q61371 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ift88Q61371 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.65■□□□□ 0.1
Ift88Q61371 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ift88Q61371 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ift88Q61371 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ift88Q61371 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ift88Q61371 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ift88Q61371 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms