Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.62□□□□□ -0.23
ClpbQ60649 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.62□□□□□ -0.23
ClpbQ60649 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ClpbQ60649 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
ClpbQ60649 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.61□□□□□ -0.23
ClpbQ60649 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.61□□□□□ -0.23
ClpbQ60649 Gm6415-201ENSMUST00000118488 348 ntBASIC13.61□□□□□ -0.23
ClpbQ60649 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.61□□□□□ -0.23
ClpbQ60649 Gm15693-201ENSMUST00000120470 637 ntBASIC13.61□□□□□ -0.23
ClpbQ60649 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.61□□□□□ -0.23
ClpbQ60649 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ClpbQ60649 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ClpbQ60649 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ClpbQ60649 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.61□□□□□ -0.23
ClpbQ60649 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.61□□□□□ -0.23
ClpbQ60649 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.61□□□□□ -0.23
ClpbQ60649 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.61□□□□□ -0.23
ClpbQ60649 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ClpbQ60649 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.61□□□□□ -0.23
ClpbQ60649 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.61□□□□□ -0.23
ClpbQ60649 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ClpbQ60649 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ClpbQ60649 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
ClpbQ60649 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.6□□□□□ -0.23
ClpbQ60649 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.6□□□□□ -0.23
ClpbQ60649 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ClpbQ60649 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ClpbQ60649 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Gm14057-201ENSMUST00000120631 482 ntBASIC13.6□□□□□ -0.23
ClpbQ60649 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.6□□□□□ -0.23
ClpbQ60649 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
ClpbQ60649 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.6□□□□□ -0.23
ClpbQ60649 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ClpbQ60649 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ClpbQ60649 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.6□□□□□ -0.23
ClpbQ60649 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ClpbQ60649 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
ClpbQ60649 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ClpbQ60649 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.59□□□□□ -0.23
ClpbQ60649 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
ClpbQ60649 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
ClpbQ60649 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ClpbQ60649 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms