Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nr1h4Q60641 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Gm16198-201ENSMUST00000118766 670 ntBASIC13.5□□□□□ -0.25
Nr1h4Q60641 Gm11452-201ENSMUST00000122376 690 ntBASIC13.5□□□□□ -0.25
Nr1h4Q60641 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nr1h4Q60641 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Mir8098-201ENSMUST00000184011 137 ntBASIC13.5□□□□□ -0.25
Nr1h4Q60641 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.5□□□□□ -0.25
Nr1h4Q60641 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nr1h4Q60641 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nr1h4Q60641 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.49□□□□□ -0.25
Nr1h4Q60641 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.49□□□□□ -0.25
Nr1h4Q60641 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Gm27628-201ENSMUST00000184911 107 ntBASIC13.49□□□□□ -0.25
Nr1h4Q60641 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Gm15590-201ENSMUST00000078419 552 ntBASIC13.49□□□□□ -0.25
Nr1h4Q60641 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.49□□□□□ -0.25
Nr1h4Q60641 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.49□□□□□ -0.25
Nr1h4Q60641 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nr1h4Q60641 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nr1h4Q60641 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms