Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim58Q5NCC9 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim58Q5NCC9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Trim58Q5NCC9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim58Q5NCC9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim58Q5NCC9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim58Q5NCC9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim58Q5NCC9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trim58Q5NCC9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.93■□□□□ 0.46
Trim58Q5NCC9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Mir125a-201ENSMUST00000083545 68 ntBASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim58Q5NCC9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Gm2756-201ENSMUST00000195851 400 ntBASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim58Q5NCC9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 AA543401-201ENSMUST00000164248 1269 ntBASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim58Q5NCC9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms