Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.33□□□□□ -0.28
Mmp25Q3U435 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Mmp25Q3U435 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Gm15393-201ENSMUST00000120499 219 ntBASIC13.32□□□□□ -0.28
Mmp25Q3U435 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.32□□□□□ -0.28
Mmp25Q3U435 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.32□□□□□ -0.28
Mmp25Q3U435 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Mmp25Q3U435 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.31□□□□□ -0.28
Mmp25Q3U435 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.31□□□□□ -0.28
Mmp25Q3U435 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Gm12585-201ENSMUST00000117307 290 ntBASIC13.31□□□□□ -0.28
Mmp25Q3U435 Gm4875-201ENSMUST00000118257 786 ntBASIC13.31□□□□□ -0.28
Mmp25Q3U435 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Gm8584-201ENSMUST00000171982 758 ntBASIC13.31□□□□□ -0.28
Mmp25Q3U435 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.31□□□□□ -0.28
Mmp25Q3U435 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Gm18027-201ENSMUST00000218947 619 ntBASIC13.31□□□□□ -0.28
Mmp25Q3U435 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.31□□□□□ -0.28
Mmp25Q3U435 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.31□□□□□ -0.28
Mmp25Q3U435 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Mmp25Q3U435 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Mmp25Q3U435 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp25Q3U435 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp25Q3U435 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Mmp25Q3U435 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms