Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tmem88bQ3TYP4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tmem88bQ3TYP4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Mir1894-201ENSMUST00000122802 81 ntBASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Mir7654-201ENSMUST00000185082 70 ntBASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Gm18307-201ENSMUST00000206864 949 ntBASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Gm5425-201ENSMUST00000214125 459 ntBASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 BC001981-202ENSMUST00000191393 1545 ntBASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tmem88bQ3TYP4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Gm12957-201ENSMUST00000117835 377 ntBASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Gm9726-201ENSMUST00000180321 678 ntBASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Gm37230-201ENSMUST00000194491 818 ntBASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Olfr286-202ENSMUST00000205305 969 ntBASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tmem88bQ3TYP4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.77□□□□□ -0.52
Tmem88bQ3TYP4 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.77□□□□□ -0.52
Tmem88bQ3TYP4 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tmem88bQ3TYP4 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tmem88bQ3TYP4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Tmem88bQ3TYP4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tmem88bQ3TYP4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Tmem88bQ3TYP4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Tmem88bQ3TYP4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem88bQ3TYP4 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem88bQ3TYP4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem88bQ3TYP4 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem88bQ3TYP4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Tmem88bQ3TYP4 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Tmem88bQ3TYP4 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms