Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trim43aQ3TL54 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trim43aQ3TL54 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trim43aQ3TL54 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.03■□□□□ -0
Trim43aQ3TL54 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43aQ3TL54 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Trim43aQ3TL54 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trim43aQ3TL54 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim43aQ3TL54 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim43aQ3TL54 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43aQ3TL54 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43aQ3TL54 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.03■□□□□ -0
Trim43aQ3TL54 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43aQ3TL54 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
Trim43aQ3TL54 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim43aQ3TL54 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trim43aQ3TL54 Gm16198-201ENSMUST00000118766 670 ntBASIC15.03■□□□□ -0
Trim43aQ3TL54 Gm13597-201ENSMUST00000121239 375 ntBASIC15.03■□□□□ -0
Trim43aQ3TL54 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.03■□□□□ -0
Trim43aQ3TL54 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trim43aQ3TL54 Mir8117-201ENSMUST00000184773 107 ntBASIC15.03■□□□□ -0
Trim43aQ3TL54 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.03■□□□□ -0
Trim43aQ3TL54 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.03■□□□□ -0
Trim43aQ3TL54 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43aQ3TL54 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43aQ3TL54 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43aQ3TL54 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43aQ3TL54 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43aQ3TL54 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43aQ3TL54 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43aQ3TL54 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43aQ3TL54 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43aQ3TL54 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43aQ3TL54 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43aQ3TL54 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim43aQ3TL54 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim43aQ3TL54 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43aQ3TL54 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43aQ3TL54 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43aQ3TL54 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43aQ3TL54 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43aQ3TL54 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43aQ3TL54 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43aQ3TL54 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Trim43aQ3TL54 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43aQ3TL54 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.02■□□□□ -0
Trim43aQ3TL54 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43aQ3TL54 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim43aQ3TL54 Gm5479-201ENSMUST00000160578 435 ntBASIC15.02■□□□□ -0
Trim43aQ3TL54 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43aQ3TL54 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.02■□□□□ -0
Trim43aQ3TL54 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43aQ3TL54 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.02■□□□□ -0
Trim43aQ3TL54 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.02■□□□□ -0
Trim43aQ3TL54 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim43aQ3TL54 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43aQ3TL54 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43aQ3TL54 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43aQ3TL54 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trim43aQ3TL54 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trim43aQ3TL54 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43aQ3TL54 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43aQ3TL54 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43aQ3TL54 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43aQ3TL54 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43aQ3TL54 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43aQ3TL54 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43aQ3TL54 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
Trim43aQ3TL54 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim43aQ3TL54 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.01□□□□□ -0.01
Trim43aQ3TL54 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Gm2756-201ENSMUST00000195851 400 ntBASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim43aQ3TL54 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms