Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tff1Q08423 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.8□□□□□ -0.52
Tff1Q08423 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Tff1Q08423 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tff1Q08423 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tff1Q08423 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Tff1Q08423 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Tff1Q08423 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Tff1Q08423 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.79□□□□□ -0.52
Tff1Q08423 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Gm8749-201ENSMUST00000117737 331 ntBASIC11.79□□□□□ -0.52
Tff1Q08423 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Tff1Q08423 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.79□□□□□ -0.52
Tff1Q08423 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Tff1Q08423 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.79□□□□□ -0.52
Tff1Q08423 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.79□□□□□ -0.52
Tff1Q08423 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.79□□□□□ -0.52
Tff1Q08423 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.79□□□□□ -0.52
Tff1Q08423 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tff1Q08423 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.79□□□□□ -0.52
Tff1Q08423 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.79□□□□□ -0.52
Tff1Q08423 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Tff1Q08423 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Tff1Q08423 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.79□□□□□ -0.52
Tff1Q08423 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.79□□□□□ -0.52
Tff1Q08423 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tff1Q08423 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Tff1Q08423 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.78□□□□□ -0.52
Tff1Q08423 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Tff1Q08423 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.78□□□□□ -0.52
Tff1Q08423 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.78□□□□□ -0.52
Tff1Q08423 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.78□□□□□ -0.52
Tff1Q08423 Gm20949-201ENSMUST00000206478 952 ntBASIC11.78□□□□□ -0.52
Tff1Q08423 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.78□□□□□ -0.52
Tff1Q08423 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Tff1Q08423 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.78□□□□□ -0.52
Tff1Q08423 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Tff1Q08423 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Tff1Q08423 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Tff1Q08423 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Tff1Q08423 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms