Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn6Q03958 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.24□□□□□ -0.13
Pfdn6Q03958 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn6Q03958 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.23□□□□□ -0.13
Pfdn6Q03958 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Gm11745-201ENSMUST00000121669 448 ntBASIC14.23□□□□□ -0.13
Pfdn6Q03958 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.23□□□□□ -0.13
Pfdn6Q03958 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.23□□□□□ -0.13
Pfdn6Q03958 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn6Q03958 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.22□□□□□ -0.13
Pfdn6Q03958 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.22□□□□□ -0.13
Pfdn6Q03958 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.22□□□□□ -0.13
Pfdn6Q03958 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.22□□□□□ -0.13
Pfdn6Q03958 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.22□□□□□ -0.13
Pfdn6Q03958 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.22□□□□□ -0.13
Pfdn6Q03958 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn6Q03958 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms