Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm24644-201ENSMUST00000157114 139 ntBASIC17.64■□□□□ 0.41
Smarcc1P97496 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.64■□□□□ 0.41
Smarcc1P97496 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC17.64■□□□□ 0.41
Smarcc1P97496 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC17.64■□□□□ 0.41
Smarcc1P97496 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC17.64■□□□□ 0.41
Smarcc1P97496 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.64■□□□□ 0.41
Smarcc1P97496 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC17.64■□□□□ 0.41
Smarcc1P97496 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc1P97496 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Smarcc1P97496 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc1P97496 Sybu-209ENSMUST00000228639 4113 ntBASIC17.64■□□□□ 0.41
Smarcc1P97496 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc1P97496 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc1P97496 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc1P97496 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc1P97496 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc1P97496 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc1P97496 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc1P97496 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc1P97496 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc1P97496 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc1P97496 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcc1P97496 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc1P97496 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc1P97496 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc1P97496 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc1P97496 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc1P97496 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc1P97496 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc1P97496 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc1P97496 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc1P97496 Gm23931-201ENSMUST00000103842 109 ntBASIC17.63■□□□□ 0.41
Smarcc1P97496 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc1P97496 Gm5187-201ENSMUST00000117317 991 ntBASIC17.63■□□□□ 0.41
Smarcc1P97496 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.63■□□□□ 0.41
Smarcc1P97496 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Smarcc1P97496 Gm12384-201ENSMUST00000119228 919 ntBASIC17.63■□□□□ 0.41
Smarcc1P97496 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.63■□□□□ 0.41
Smarcc1P97496 Gm24420-201ENSMUST00000176676 59 ntBASIC17.63■□□□□ 0.41
Smarcc1P97496 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.63■□□□□ 0.41
Smarcc1P97496 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.63■□□□□ 0.41
Smarcc1P97496 Gm7399-201ENSMUST00000032395 858 ntBASIC17.63■□□□□ 0.41
Smarcc1P97496 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.63■□□□□ 0.41
Smarcc1P97496 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc1P97496 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Smarcc1P97496 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.63■□□□□ 0.41
Smarcc1P97496 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC17.63■□□□□ 0.41
Smarcc1P97496 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc1P97496 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc1P97496 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc1P97496 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Smarcc1P97496 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc1P97496 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcc1P97496 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc1P97496 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc1P97496 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc1P97496 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc1P97496 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc1P97496 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc1P97496 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc1P97496 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Smarcc1P97496 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc1P97496 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Smarcc1P97496 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc1P97496 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc1P97496 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc1P97496 Gm15371-201ENSMUST00000117057 784 ntBASIC17.62■□□□□ 0.41
Smarcc1P97496 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc1P97496 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc1P97496 Gm27772-201ENSMUST00000184900 187 ntBASIC17.62■□□□□ 0.41
Smarcc1P97496 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC17.62■□□□□ 0.41
Smarcc1P97496 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.62■□□□□ 0.41
Smarcc1P97496 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc1P97496 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc1P97496 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc1P97496 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc1P97496 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Smarcc1P97496 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.62■□□□□ 0.41
Smarcc1P97496 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcc1P97496 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcc1P97496 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcc1P97496 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcc1P97496 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcc1P97496 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcc1P97496 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Smarcc1P97496 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcc1P97496 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC17.61■□□□□ 0.41
Smarcc1P97496 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcc1P97496 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.61■□□□□ 0.41
Smarcc1P97496 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcc1P97496 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcc1P97496 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC17.61■□□□□ 0.41
Smarcc1P97496 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcc1P97496 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcc1P97496 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC17.61■□□□□ 0.41
Smarcc1P97496 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcc1P97496 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcc1P97496 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC17.61■□□□□ 0.41
Smarcc1P97496 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Smarcc1P97496 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms