Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SgcbP82349 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
SgcbP82349 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.64□□□□□ -0.39
SgcbP82349 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Gm14057-201ENSMUST00000120631 482 ntBASIC12.64□□□□□ -0.39
SgcbP82349 Gm12882-201ENSMUST00000121696 517 ntBASIC12.64□□□□□ -0.39
SgcbP82349 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.64□□□□□ -0.39
SgcbP82349 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.64□□□□□ -0.39
SgcbP82349 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SgcbP82349 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Gm16476-201ENSMUST00000221544 139 ntBASIC12.64□□□□□ -0.39
SgcbP82349 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.64□□□□□ -0.39
SgcbP82349 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SgcbP82349 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
SgcbP82349 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SgcbP82349 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.63□□□□□ -0.39
SgcbP82349 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Gm13223-201ENSMUST00000118609 747 ntBASIC12.63□□□□□ -0.39
SgcbP82349 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.63□□□□□ -0.39
SgcbP82349 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.63□□□□□ -0.39
SgcbP82349 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.63□□□□□ -0.39
SgcbP82349 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Gm19087-201ENSMUST00000191430 946 ntBASIC12.63□□□□□ -0.39
SgcbP82349 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.63□□□□□ -0.39
SgcbP82349 Gm20949-201ENSMUST00000206478 952 ntBASIC12.63□□□□□ -0.39
SgcbP82349 Gm46209-201ENSMUST00000217912 553 ntBASIC12.63□□□□□ -0.39
SgcbP82349 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SgcbP82349 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
SgcbP82349 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.63□□□□□ -0.39
SgcbP82349 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SgcbP82349 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SgcbP82349 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SgcbP82349 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SgcbP82349 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.62□□□□□ -0.39
SgcbP82349 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.62□□□□□ -0.39
SgcbP82349 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.62□□□□□ -0.39
SgcbP82349 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
SgcbP82349 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SgcbP82349 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SgcbP82349 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.62□□□□□ -0.39
SgcbP82349 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms