Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ldb1P70662 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ldb1P70662 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.11□□□□□ -0.15
Ldb1P70662 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.11□□□□□ -0.15
Ldb1P70662 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ldb1P70662 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ldb1P70662 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.11□□□□□ -0.15
Ldb1P70662 Gm18766-201ENSMUST00000189811 808 ntBASIC14.11□□□□□ -0.15
Ldb1P70662 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.11□□□□□ -0.15
Ldb1P70662 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Ldb1P70662 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ldb1P70662 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ldb1P70662 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Ldb1P70662 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ldb1P70662 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.1□□□□□ -0.15
Ldb1P70662 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Gm25287-201ENSMUST00000103846 110 ntBASIC14.1□□□□□ -0.15
Ldb1P70662 Gm22918-201ENSMUST00000103855 110 ntBASIC14.1□□□□□ -0.15
Ldb1P70662 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.1□□□□□ -0.15
Ldb1P70662 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Gm6222-201ENSMUST00000120787 396 ntBASIC14.1□□□□□ -0.15
Ldb1P70662 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.1□□□□□ -0.15
Ldb1P70662 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Ldb1P70662 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Gm9824-201ENSMUST00000178707 561 ntBASIC14.1□□□□□ -0.15
Ldb1P70662 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.1□□□□□ -0.15
Ldb1P70662 Gm5779-201ENSMUST00000218467 910 ntBASIC14.1□□□□□ -0.15
Ldb1P70662 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ldb1P70662 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ldb1P70662 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.1□□□□□ -0.15
Ldb1P70662 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ldb1P70662 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ldb1P70662 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ldb1P70662 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ldb1P70662 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms