Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Ybx1P62960 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ybx1P62960 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ybx1P62960 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ybx1P62960 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.48□□□□□ -0.09
Ybx1P62960 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ybx1P62960 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ybx1P62960 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ybx1P62960 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ybx1P62960 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ybx1P62960 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.48□□□□□ -0.09
Ybx1P62960 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ybx1P62960 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ybx1P62960 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.48□□□□□ -0.09
Ybx1P62960 Gm27892-201ENSMUST00000185017 106 ntBASIC14.48□□□□□ -0.09
Ybx1P62960 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.48□□□□□ -0.09
Ybx1P62960 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ybx1P62960 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.48□□□□□ -0.09
Ybx1P62960 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ybx1P62960 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ybx1P62960 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ybx1P62960 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ybx1P62960 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.48□□□□□ -0.09
Ybx1P62960 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ybx1P62960 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.48□□□□□ -0.09
Ybx1P62960 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ybx1P62960 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ybx1P62960 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ybx1P62960 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Ybx1P62960 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ybx1P62960 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.47□□□□□ -0.09
Ybx1P62960 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.47□□□□□ -0.09
Ybx1P62960 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.47□□□□□ -0.09
Ybx1P62960 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.47□□□□□ -0.09
Ybx1P62960 Gm43630-201ENSMUST00000201550 776 ntBASIC14.47□□□□□ -0.09
Ybx1P62960 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ybx1P62960 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Gm9899-201ENSMUST00000065519 555 ntBASIC14.47□□□□□ -0.09
Ybx1P62960 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.47□□□□□ -0.09
Ybx1P62960 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ybx1P62960 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ybx1P62960 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ybx1P62960 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ybx1P62960 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.46□□□□□ -0.09
Ybx1P62960 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ybx1P62960 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ybx1P62960 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ybx1P62960 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ybx1P62960 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ybx1P62960 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.46□□□□□ -0.09
Ybx1P62960 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.46□□□□□ -0.09
Ybx1P62960 Gm18307-201ENSMUST00000206864 949 ntBASIC14.46□□□□□ -0.09
Ybx1P62960 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.46□□□□□ -0.09
Ybx1P62960 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ybx1P62960 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ybx1P62960 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ybx1P62960 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ybx1P62960 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ybx1P62960 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ybx1P62960 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ybx1P62960 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ybx1P62960 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ybx1P62960 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ybx1P62960 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ybx1P62960 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ybx1P62960 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ybx1P62960 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Ybx1P62960 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.45□□□□□ -0.1
Ybx1P62960 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.45□□□□□ -0.1
Ybx1P62960 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ybx1P62960 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ybx1P62960 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ybx1P62960 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ybx1P62960 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ybx1P62960 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ybx1P62960 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms