Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sec61a1P61620 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Sec61a1P61620 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
Sec61a1P61620 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sec61a1P61620 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sec61a1P61620 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sec61a1P61620 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sec61a1P61620 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sec61a1P61620 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sec61a1P61620 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sec61a1P61620 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.5□□□□□ -0.41
Sec61a1P61620 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sec61a1P61620 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.5□□□□□ -0.41
Sec61a1P61620 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Sec61a1P61620 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.5□□□□□ -0.41
Sec61a1P61620 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Sec61a1P61620 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sec61a1P61620 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sec61a1P61620 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.49□□□□□ -0.41
Sec61a1P61620 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.49□□□□□ -0.41
Sec61a1P61620 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.49□□□□□ -0.41
Sec61a1P61620 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sec61a1P61620 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.49□□□□□ -0.41
Sec61a1P61620 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Sec61a1P61620 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.49□□□□□ -0.41
Sec61a1P61620 Thap2-203ENSMUST00000218989 527 ntBASIC12.49□□□□□ -0.41
Sec61a1P61620 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.49□□□□□ -0.41
Sec61a1P61620 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.49□□□□□ -0.41
Sec61a1P61620 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Sec61a1P61620 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.49□□□□□ -0.41
Sec61a1P61620 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sec61a1P61620 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms