Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Gm42442-201ENSMUST00000197951 1133 ntBASIC16.12■□□□□ 0.17
Mmp20P57748 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp20P57748 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp20P57748 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp20P57748 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp20P57748 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.12■□□□□ 0.17
Mmp20P57748 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp20P57748 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp20P57748 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp20P57748 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp20P57748 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp20P57748 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Mmp20P57748 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp20P57748 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Mmp20P57748 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp20P57748 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp20P57748 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp20P57748 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.11■□□□□ 0.17
Mmp20P57748 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.11■□□□□ 0.17
Mmp20P57748 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Mmp20P57748 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.11■□□□□ 0.17
Mmp20P57748 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Mmp20P57748 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp20P57748 Gm44397-201ENSMUST00000195950 113 ntBASIC16.11■□□□□ 0.17
Mmp20P57748 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.11■□□□□ 0.17
Mmp20P57748 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp20P57748 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp20P57748 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp20P57748 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.11■□□□□ 0.17
Mmp20P57748 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.11■□□□□ 0.17
Mmp20P57748 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Mmp20P57748 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Mmp20P57748 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Mmp20P57748 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Mmp20P57748 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Mmp20P57748 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp20P57748 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Mmp20P57748 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp20P57748 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp20P57748 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp20P57748 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp20P57748 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp20P57748 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp20P57748 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.1■□□□□ 0.17
Mmp20P57748 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.1■□□□□ 0.17
Mmp20P57748 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.1■□□□□ 0.17
Mmp20P57748 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.1■□□□□ 0.17
Mmp20P57748 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp20P57748 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp20P57748 Gm38223-201ENSMUST00000194484 695 ntBASIC16.1■□□□□ 0.17
Mmp20P57748 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.1■□□□□ 0.17
Mmp20P57748 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp20P57748 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp20P57748 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.1■□□□□ 0.17
Mmp20P57748 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp20P57748 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp20P57748 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp20P57748 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp20P57748 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp20P57748 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp20P57748 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Mmp20P57748 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.1■□□□□ 0.17
Mmp20P57748 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Mmp20P57748 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Mmp20P57748 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Mmp20P57748 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.09■□□□□ 0.17
Mmp20P57748 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Mmp20P57748 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.09■□□□□ 0.17
Mmp20P57748 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.09■□□□□ 0.17
Mmp20P57748 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.09■□□□□ 0.17
Mmp20P57748 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.09■□□□□ 0.17
Mmp20P57748 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.09■□□□□ 0.17
Mmp20P57748 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.09■□□□□ 0.17
Mmp20P57748 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.09■□□□□ 0.17
Mmp20P57748 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.09■□□□□ 0.17
Mmp20P57748 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.09■□□□□ 0.17
Mmp20P57748 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.09■□□□□ 0.17
Mmp20P57748 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.09■□□□□ 0.17
Mmp20P57748 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Mmp20P57748 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.09■□□□□ 0.17
Mmp20P57748 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms