Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Sssca1P56873 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sssca1P56873 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sssca1P56873 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sssca1P56873 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sssca1P56873 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.46□□□□□ -0.57
Sssca1P56873 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.46□□□□□ -0.57
Sssca1P56873 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.46□□□□□ -0.57
Sssca1P56873 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.46□□□□□ -0.57
Sssca1P56873 Gm27300-201ENSMUST00000184085 97 ntBASIC11.46□□□□□ -0.57
Sssca1P56873 Gm27335-201ENSMUST00000184758 97 ntBASIC11.46□□□□□ -0.57
Sssca1P56873 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.46□□□□□ -0.57
Sssca1P56873 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.46□□□□□ -0.57
Sssca1P56873 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sssca1P56873 Gm45098-201ENSMUST00000207179 657 ntBASIC11.46□□□□□ -0.57
Sssca1P56873 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.46□□□□□ -0.57
Sssca1P56873 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sssca1P56873 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.46□□□□□ -0.57
Sssca1P56873 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sssca1P56873 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sssca1P56873 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sssca1P56873 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Sssca1P56873 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sssca1P56873 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Sssca1P56873 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sssca1P56873 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sssca1P56873 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sssca1P56873 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sssca1P56873 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Sssca1P56873 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
Sssca1P56873 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sssca1P56873 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sssca1P56873 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sssca1P56873 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sssca1P56873 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.45□□□□□ -0.58
Sssca1P56873 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sssca1P56873 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.45□□□□□ -0.58
Sssca1P56873 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sssca1P56873 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sssca1P56873 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Gm9103-201ENSMUST00000119371 405 ntBASIC11.45□□□□□ -0.58
Sssca1P56873 Gm11452-201ENSMUST00000122376 690 ntBASIC11.45□□□□□ -0.58
Sssca1P56873 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.45□□□□□ -0.58
Sssca1P56873 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.45□□□□□ -0.58
Sssca1P56873 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC11.45□□□□□ -0.58
Sssca1P56873 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.45□□□□□ -0.58
Sssca1P56873 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11.45□□□□□ -0.58
Sssca1P56873 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.45□□□□□ -0.58
Sssca1P56873 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sssca1P56873 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Sssca1P56873 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.45□□□□□ -0.58
Sssca1P56873 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.45□□□□□ -0.58
Sssca1P56873 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sssca1P56873 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Sssca1P56873 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.45□□□□□ -0.58
Sssca1P56873 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sssca1P56873 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Sssca1P56873 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.44□□□□□ -0.58
Sssca1P56873 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.44□□□□□ -0.58
Sssca1P56873 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.44□□□□□ -0.58
Sssca1P56873 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Sssca1P56873 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms