Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.92□□□□□ -0.34
Cdh11P55288 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Cdh11P55288 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Cdh11P55288 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.92□□□□□ -0.34
Cdh11P55288 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Rprl2-201ENSMUST00000157150 290 ntBASIC12.92□□□□□ -0.34
Cdh11P55288 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cdh11P55288 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdh11P55288 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdh11P55288 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.92□□□□□ -0.34
Cdh11P55288 Gm10154-201ENSMUST00000084445 354 ntBASIC12.92□□□□□ -0.34
Cdh11P55288 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cdh11P55288 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdh11P55288 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cdh11P55288 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cdh11P55288 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cdh11P55288 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.92□□□□□ -0.34
Cdh11P55288 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cdh11P55288 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdh11P55288 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdh11P55288 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdh11P55288 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdh11P55288 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Cdh11P55288 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdh11P55288 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdh11P55288 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.91□□□□□ -0.34
Cdh11P55288 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Cdh11P55288 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.91□□□□□ -0.34
Cdh11P55288 Gm16198-201ENSMUST00000118766 670 ntBASIC12.91□□□□□ -0.34
Cdh11P55288 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.91□□□□□ -0.34
Cdh11P55288 Gm10576-201ENSMUST00000191927 825 ntBASIC12.91□□□□□ -0.34
Cdh11P55288 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.91□□□□□ -0.34
Cdh11P55288 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdh11P55288 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdh11P55288 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Gm8396-201ENSMUST00000057361 823 ntBASIC12.91□□□□□ -0.34
Cdh11P55288 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.91□□□□□ -0.34
Cdh11P55288 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Cdh11P55288 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Acot6-202ENSMUST00000222921 3622 ntBASIC12.91□□□□□ -0.34
Cdh11P55288 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdh11P55288 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdh11P55288 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.91□□□□□ -0.34
Cdh11P55288 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh11P55288 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh11P55288 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh11P55288 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Cdh11P55288 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Cdh11P55288 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh11P55288 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh11P55288 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh11P55288 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh11P55288 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh11P55288 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh11P55288 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh11P55288 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.9□□□□□ -0.34
Cdh11P55288 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdh11P55288 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.9□□□□□ -0.34
Cdh11P55288 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.9□□□□□ -0.34
Cdh11P55288 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.9□□□□□ -0.34
Cdh11P55288 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms