Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.82■□□□□ 0.28
Ercc3P49135 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.82■□□□□ 0.28
Ercc3P49135 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.82■□□□□ 0.28
Ercc3P49135 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Ercc3P49135 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ercc3P49135 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ercc3P49135 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.81■□□□□ 0.28
Ercc3P49135 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.81■□□□□ 0.28
Ercc3P49135 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.81■□□□□ 0.28
Ercc3P49135 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.81■□□□□ 0.28
Ercc3P49135 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Gm44344-201ENSMUST00000200287 129 ntBASIC16.81■□□□□ 0.28
Ercc3P49135 Gm46209-201ENSMUST00000217912 553 ntBASIC16.81■□□□□ 0.28
Ercc3P49135 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ercc3P49135 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ercc3P49135 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.8■□□□□ 0.28
Ercc3P49135 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Gm13453-201ENSMUST00000118708 357 ntBASIC16.8■□□□□ 0.28
Ercc3P49135 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.8■□□□□ 0.28
Ercc3P49135 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.8■□□□□ 0.28
Ercc3P49135 Gm27989-201ENSMUST00000184721 107 ntBASIC16.8■□□□□ 0.28
Ercc3P49135 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.8■□□□□ 0.28
Ercc3P49135 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ercc3P49135 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.8■□□□□ 0.28
Ercc3P49135 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc3P49135 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Ercc3P49135 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ercc3P49135 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ercc3P49135 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.79■□□□□ 0.28
Ercc3P49135 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Ercc3P49135 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.79■□□□□ 0.28
Ercc3P49135 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.79■□□□□ 0.28
Ercc3P49135 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Gm9063-201ENSMUST00000223299 582 ntBASIC16.79■□□□□ 0.28
Ercc3P49135 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ercc3P49135 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc3P49135 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms