Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
GdnfP48540 Gm12260-201ENSMUST00000122447 411 ntBASIC12.42□□□□□ -0.42
GdnfP48540 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.42□□□□□ -0.42
GdnfP48540 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.42□□□□□ -0.42
GdnfP48540 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Gm17968-201ENSMUST00000194902 784 ntBASIC12.42□□□□□ -0.42
GdnfP48540 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.42□□□□□ -0.42
GdnfP48540 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.42□□□□□ -0.42
GdnfP48540 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.42□□□□□ -0.42
GdnfP48540 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
GdnfP48540 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.42□□□□□ -0.42
GdnfP48540 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
GdnfP48540 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Gm9727-201ENSMUST00000161387 555 ntBASIC12.41□□□□□ -0.42
GdnfP48540 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GdnfP48540 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
GdnfP48540 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
GdnfP48540 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.4□□□□□ -0.42
GdnfP48540 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.4□□□□□ -0.42
GdnfP48540 Gm11779-201ENSMUST00000118541 368 ntBASIC12.4□□□□□ -0.42
GdnfP48540 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.4□□□□□ -0.42
GdnfP48540 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.4□□□□□ -0.42
GdnfP48540 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
GdnfP48540 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
GdnfP48540 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
GdnfP48540 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
GdnfP48540 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.4□□□□□ -0.42
GdnfP48540 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
GdnfP48540 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
GdnfP48540 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
GdnfP48540 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
GdnfP48540 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
GdnfP48540 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.39□□□□□ -0.43
GdnfP48540 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GdnfP48540 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.39□□□□□ -0.43
GdnfP48540 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms