Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx2P48379 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx2P48379 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx2P48379 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rfx2P48379 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rfx2P48379 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx2P48379 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rfx2P48379 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.86□□□□□ -0.03
Rfx2P48379 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx2P48379 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.86□□□□□ -0.03
Rfx2P48379 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx2P48379 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx2P48379 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx2P48379 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx2P48379 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx2P48379 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx2P48379 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.86□□□□□ -0.03
Rfx2P48379 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.86□□□□□ -0.03
Rfx2P48379 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.86□□□□□ -0.03
Rfx2P48379 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx2P48379 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx2P48379 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rfx2P48379 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx2P48379 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rfx2P48379 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Rfx2P48379 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx2P48379 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx2P48379 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rfx2P48379 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx2P48379 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx2P48379 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx2P48379 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx2P48379 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx2P48379 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx2P48379 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.85□□□□□ -0.03
Rfx2P48379 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Rfx2P48379 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Rfx2P48379 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rfx2P48379 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx2P48379 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Rfx2P48379 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.85□□□□□ -0.03
Rfx2P48379 Gm15487-201ENSMUST00000122373 465 ntBASIC14.85□□□□□ -0.03
Rfx2P48379 Mir1897-201ENSMUST00000122581 272 ntBASIC14.85□□□□□ -0.03
Rfx2P48379 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.85□□□□□ -0.03
Rfx2P48379 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx2P48379 Gm16476-201ENSMUST00000221544 139 ntBASIC14.85□□□□□ -0.03
Rfx2P48379 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx2P48379 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx2P48379 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx2P48379 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx2P48379 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx2P48379 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx2P48379 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfx2P48379 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.84□□□□□ -0.03
Rfx2P48379 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.84□□□□□ -0.03
Rfx2P48379 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.84□□□□□ -0.03
Rfx2P48379 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.84□□□□□ -0.03
Rfx2P48379 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Rfx2P48379 Gm27631-201ENSMUST00000184163 466 ntBASIC14.84□□□□□ -0.03
Rfx2P48379 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Syt7-204ENSMUST00000223586 1344 ntBASIC14.84□□□□□ -0.03
Rfx2P48379 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rfx2P48379 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rfx2P48379 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfx2P48379 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rfx2P48379 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rfx2P48379 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rfx2P48379 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rfx2P48379 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.83□□□□□ -0.03
Rfx2P48379 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rfx2P48379 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rfx2P48379 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rfx2P48379 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rfx2P48379 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.83□□□□□ -0.04
Rfx2P48379 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx2P48379 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx2P48379 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx2P48379 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfx2P48379 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.83□□□□□ -0.04
Rfx2P48379 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms