Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Gm25927-201ENSMUST00000175058 117 ntBASIC9.17□□□□□ -0.94
Xcl1P47993 Gm7286-201ENSMUST00000182691 1007 ntBASIC9.17□□□□□ -0.94
Xcl1P47993 Gm21168-201ENSMUST00000199646 1096 ntBASIC9.17□□□□□ -0.94
Xcl1P47993 CT009510.1-201ENSMUST00000227972 270 ntBASIC9.17□□□□□ -0.94
Xcl1P47993 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Xcl1P47993 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
Xcl1P47993 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Xcl1P47993 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Xcl1P47993 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Gm15889-202ENSMUST00000212669 2443 ntBASIC9.16□□□□□ -0.94
Xcl1P47993 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Xcl1P47993 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Xcl1P47993 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Xcl1P47993 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Xcl1P47993 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC9.16□□□□□ -0.94
Xcl1P47993 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Gm10729-202ENSMUST00000193403 1375 ntBASIC9.16□□□□□ -0.94
Xcl1P47993 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC9.16□□□□□ -0.94
Xcl1P47993 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Xcl1P47993 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
Xcl1P47993 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC9.16□□□□□ -0.94
Xcl1P47993 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC9.16□□□□□ -0.94
Xcl1P47993 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 AC114585.2-202ENSMUST00000228094 426 ntBASIC9.16□□□□□ -0.94
Xcl1P47993 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Xcl1P47993 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC9.16□□□□□ -0.94
Xcl1P47993 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC9.16□□□□□ -0.94
Xcl1P47993 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Xcl1P47993 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Xcl1P47993 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Xcl1P47993 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Xcl1P47993 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC9.16□□□□□ -0.94
Xcl1P47993 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Xcl1P47993 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Xcl1P47993 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.15□□□□□ -0.94
Xcl1P47993 Gm20554-201ENSMUST00000177421 2352 ntBASIC9.15□□□□□ -0.94
Xcl1P47993 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC9.15□□□□□ -0.94
Xcl1P47993 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Xcl1P47993 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC9.15□□□□□ -0.94
Xcl1P47993 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC9.15□□□□□ -0.94
Xcl1P47993 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Xcl1P47993 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Xcl1P47993 Gm10052-201ENSMUST00000168019 960 ntBASIC9.15□□□□□ -0.94
Xcl1P47993 Gm21956-201ENSMUST00000179946 522 ntBASIC9.15□□□□□ -0.94
Xcl1P47993 Gm42555-201ENSMUST00000199304 1039 ntBASIC9.15□□□□□ -0.94
Xcl1P47993 Gm44672-201ENSMUST00000206944 1098 ntBASIC9.15□□□□□ -0.94
Xcl1P47993 Gm18671-201ENSMUST00000214826 683 ntBASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms