Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.6□□□□□ -0.23
Sox18P43680 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sox18P43680 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox18P43680 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox18P43680 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Gm15460-201ENSMUST00000118147 391 ntBASIC13.59□□□□□ -0.23
Sox18P43680 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Gm13464-201ENSMUST00000119418 935 ntBASIC13.59□□□□□ -0.23
Sox18P43680 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox18P43680 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox18P43680 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sox18P43680 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC13.59□□□□□ -0.23
Sox18P43680 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sox18P43680 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sox18P43680 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.59□□□□□ -0.23
Sox18P43680 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.59□□□□□ -0.23
Sox18P43680 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sox18P43680 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sox18P43680 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sox18P43680 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Sox18P43680 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sox18P43680 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.58□□□□□ -0.23
Sox18P43680 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.58□□□□□ -0.23
Sox18P43680 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.58□□□□□ -0.24
Sox18P43680 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Sox18P43680 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.58□□□□□ -0.24
Sox18P43680 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.58□□□□□ -0.24
Sox18P43680 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.58□□□□□ -0.24
Sox18P43680 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.58□□□□□ -0.24
Sox18P43680 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 Gm7561-201ENSMUST00000211203 886 ntBASIC13.58□□□□□ -0.24
Sox18P43680 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Sox18P43680 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.58□□□□□ -0.24
Sox18P43680 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.58□□□□□ -0.24
Sox18P43680 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Sox18P43680 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Sox18P43680 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.58□□□□□ -0.24
Sox18P43680 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Sox18P43680 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.58□□□□□ -0.24
Sox18P43680 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sox18P43680 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Sox18P43680 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.57□□□□□ -0.24
Sox18P43680 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sox18P43680 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Sox18P43680 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.57□□□□□ -0.24
Sox18P43680 Gm2495-201ENSMUST00000191160 466 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms