Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.67□□□□□ -0.22
Tnfsf4P43488 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.67□□□□□ -0.22
Tnfsf4P43488 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tnfsf4P43488 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.66□□□□□ -0.22
Tnfsf4P43488 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.66□□□□□ -0.22
Tnfsf4P43488 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.66□□□□□ -0.22
Tnfsf4P43488 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.66□□□□□ -0.22
Tnfsf4P43488 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Gm6973-201ENSMUST00000117080 721 ntBASIC13.66□□□□□ -0.22
Tnfsf4P43488 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Gm9727-201ENSMUST00000161387 555 ntBASIC13.66□□□□□ -0.22
Tnfsf4P43488 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.66□□□□□ -0.22
Tnfsf4P43488 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Mzt1-203ENSMUST00000227948 952 ntBASIC13.66□□□□□ -0.22
Tnfsf4P43488 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfsf4P43488 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Tnfsf4P43488 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.65□□□□□ -0.22
Tnfsf4P43488 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Gm15427-201ENSMUST00000117288 531 ntBASIC13.65□□□□□ -0.22
Tnfsf4P43488 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.65□□□□□ -0.22
Tnfsf4P43488 Gm11543-201ENSMUST00000120758 370 ntBASIC13.65□□□□□ -0.22
Tnfsf4P43488 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.65□□□□□ -0.22
Tnfsf4P43488 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.65□□□□□ -0.22
Tnfsf4P43488 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.65□□□□□ -0.22
Tnfsf4P43488 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.65□□□□□ -0.22
Tnfsf4P43488 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.65□□□□□ -0.22
Tnfsf4P43488 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfsf4P43488 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms