Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nkx2-2P42586 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13□□□□□ -0.33
Nkx2-2P42586 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nkx2-2P42586 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Mir1897-201ENSMUST00000122581 272 ntBASIC12.99□□□□□ -0.33
Nkx2-2P42586 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.99□□□□□ -0.33
Nkx2-2P42586 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Gm6916-202ENSMUST00000205523 195 ntBASIC12.99□□□□□ -0.33
Nkx2-2P42586 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.99□□□□□ -0.33
Nkx2-2P42586 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx2-2P42586 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.98□□□□□ -0.33
Nkx2-2P42586 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkx2-2P42586 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Gm13616-201ENSMUST00000120600 222 ntBASIC12.98□□□□□ -0.33
Nkx2-2P42586 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Gm27618-201ENSMUST00000183671 60 ntBASIC12.98□□□□□ -0.33
Nkx2-2P42586 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.98□□□□□ -0.33
Nkx2-2P42586 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.98□□□□□ -0.33
Nkx2-2P42586 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx2-2P42586 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx2-2P42586 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms