Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Abca1P41233 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Abca1P41233 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Abca1P41233 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Abca1P41233 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Abca1P41233 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Abca1P41233 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Abca1P41233 Gm16476-201ENSMUST00000221544 139 ntBASIC11.8□□□□□ -0.52
Abca1P41233 Gm9797-201ENSMUST00000052902 613 ntBASIC11.8□□□□□ -0.52
Abca1P41233 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Abca1P41233 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Abca1P41233 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Abca1P41233 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Abca1P41233 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Abca1P41233 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Abca1P41233 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Abca1P41233 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.8□□□□□ -0.52
Abca1P41233 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Abca1P41233 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Abca1P41233 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Abca1P41233 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Abca1P41233 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Abca1P41233 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Abca1P41233 Gm15824-201ENSMUST00000119516 955 ntBASIC11.8□□□□□ -0.52
Abca1P41233 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.8□□□□□ -0.52
Abca1P41233 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.8□□□□□ -0.52
Abca1P41233 Mir6420-201ENSMUST00000185032 102 ntBASIC11.8□□□□□ -0.52
Abca1P41233 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Abca1P41233 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Abca1P41233 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Abca1P41233 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Abca1P41233 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Abca1P41233 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.79□□□□□ -0.52
Abca1P41233 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Gm12091-201ENSMUST00000146791 830 ntBASIC11.79□□□□□ -0.52
Abca1P41233 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Abca1P41233 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.79□□□□□ -0.52
Abca1P41233 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.79□□□□□ -0.52
Abca1P41233 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Abca1P41233 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Gm17150-201ENSMUST00000165577 381 ntBASIC11.79□□□□□ -0.52
Abca1P41233 Gm27631-201ENSMUST00000184163 466 ntBASIC11.79□□□□□ -0.52
Abca1P41233 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.79□□□□□ -0.52
Abca1P41233 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Abca1P41233 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Abca1P41233 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.78□□□□□ -0.52
Abca1P41233 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Abca1P41233 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.78□□□□□ -0.52
Abca1P41233 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.78□□□□□ -0.52
Abca1P41233 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Abca1P41233 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Abca1P41233 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.78□□□□□ -0.52
Abca1P41233 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Abca1P41233 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.78□□□□□ -0.52
Abca1P41233 Gm9229-201ENSMUST00000222777 126 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms