Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm5cP41230 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Kdm5cP41230 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Kdm5cP41230 AC132384.14-201ENSMUST00000219346 1147 ntBASIC20.17■□□□□ 0.82
Kdm5cP41230 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm5cP41230 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Kdm5cP41230 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC20.17■□□□□ 0.82
Kdm5cP41230 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm5cP41230 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm5cP41230 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm5cP41230 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Kdm5cP41230 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC20.17■□□□□ 0.82
Kdm5cP41230 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm5cP41230 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm5cP41230 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm5cP41230 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm5cP41230 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Kdm5cP41230 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm5cP41230 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC20.17■□□□□ 0.82
Kdm5cP41230 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Kdm5cP41230 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Kdm5cP41230 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC20.17■□□□□ 0.82
Kdm5cP41230 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm5cP41230 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm5cP41230 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm5cP41230 Gm7118-201ENSMUST00000200167 1003 ntBASIC20.17■□□□□ 0.82
Kdm5cP41230 Gm18753-201ENSMUST00000201000 566 ntBASIC20.17■□□□□ 0.82
Kdm5cP41230 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC20.17■□□□□ 0.82
Kdm5cP41230 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Kdm5cP41230 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC20.17■□□□□ 0.82
Kdm5cP41230 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm5cP41230 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Kdm5cP41230 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm5cP41230 AC113441.2-201ENSMUST00000221538 1468 ntBASIC20.16■□□□□ 0.82
Kdm5cP41230 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm5cP41230 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Kdm5cP41230 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm5cP41230 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Kdm5cP41230 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC20.16■□□□□ 0.82
Kdm5cP41230 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC20.16■□□□□ 0.82
Kdm5cP41230 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC20.16■□□□□ 0.82
Kdm5cP41230 CT573034.1-201ENSMUST00000222983 313 ntBASIC20.16■□□□□ 0.82
Kdm5cP41230 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm5cP41230 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm5cP41230 Gm3695-201ENSMUST00000087222 1009 ntBASIC20.16■□□□□ 0.82
Kdm5cP41230 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC20.16■□□□□ 0.82
Kdm5cP41230 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Kdm5cP41230 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm5cP41230 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Kdm5cP41230 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm5cP41230 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm5cP41230 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Kdm5cP41230 Gm6159-201ENSMUST00000191249 1724 ntBASIC20.15■□□□□ 0.82
Kdm5cP41230 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC20.15■□□□□ 0.82
Kdm5cP41230 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm5cP41230 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm5cP41230 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm5cP41230 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC20.15■□□□□ 0.82
Kdm5cP41230 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Kdm5cP41230 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm5cP41230 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Kdm5cP41230 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm5cP41230 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm5cP41230 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm5cP41230 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm5cP41230 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC20.15■□□□□ 0.82
Kdm5cP41230 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm5cP41230 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Kdm5cP41230 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Kdm5cP41230 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Kdm5cP41230 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Kdm5cP41230 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Kdm5cP41230 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm5cP41230 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm5cP41230 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm5cP41230 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm5cP41230 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm5cP41230 Gm2606-201ENSMUST00000100754 1002 ntBASIC20.14■□□□□ 0.81
Kdm5cP41230 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm5cP41230 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC20.14■□□□□ 0.81
Kdm5cP41230 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm5cP41230 Gm27320-201ENSMUST00000184892 109 ntBASIC20.14■□□□□ 0.81
Kdm5cP41230 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC20.14■□□□□ 0.81
Kdm5cP41230 Gm7293-201ENSMUST00000216682 1007 ntBASIC20.14■□□□□ 0.81
Kdm5cP41230 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Kdm5cP41230 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm5cP41230 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm5cP41230 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm5cP41230 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm5cP41230 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC20.14■□□□□ 0.81
Kdm5cP41230 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm5cP41230 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm5cP41230 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Kdm5cP41230 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Kdm5cP41230 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm5cP41230 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Kdm5cP41230 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Kdm5cP41230 Gm3890-201ENSMUST00000182416 207 ntBASIC20.13■□□□□ 0.81
Kdm5cP41230 Gm9445-201ENSMUST00000207454 1285 ntBASIC20.13■□□□□ 0.81
Kdm5cP41230 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms