Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TfamP40630 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TfamP40630 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TfamP40630 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.73□□□□□ -0.21
TfamP40630 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.73□□□□□ -0.21
TfamP40630 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.73□□□□□ -0.21
TfamP40630 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TfamP40630 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TfamP40630 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.73□□□□□ -0.21
TfamP40630 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.73□□□□□ -0.21
TfamP40630 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TfamP40630 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.73□□□□□ -0.21
TfamP40630 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TfamP40630 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TfamP40630 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TfamP40630 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TfamP40630 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TfamP40630 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TfamP40630 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TfamP40630 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TfamP40630 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TfamP40630 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
TfamP40630 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TfamP40630 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TfamP40630 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TfamP40630 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.73□□□□□ -0.21
TfamP40630 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.73□□□□□ -0.21
TfamP40630 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TfamP40630 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TfamP40630 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.72□□□□□ -0.21
TfamP40630 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.72□□□□□ -0.21
TfamP40630 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.72□□□□□ -0.21
TfamP40630 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.72□□□□□ -0.21
TfamP40630 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.72□□□□□ -0.21
TfamP40630 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.72□□□□□ -0.21
TfamP40630 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.72□□□□□ -0.21
TfamP40630 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
TfamP40630 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TfamP40630 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TfamP40630 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.71□□□□□ -0.21
TfamP40630 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TfamP40630 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TfamP40630 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TfamP40630 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TfamP40630 Gm11025-201ENSMUST00000140773 466 ntBASIC13.71□□□□□ -0.21
TfamP40630 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.71□□□□□ -0.21
TfamP40630 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.71□□□□□ -0.21
TfamP40630 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Gm8584-201ENSMUST00000171982 758 ntBASIC13.71□□□□□ -0.21
TfamP40630 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.71□□□□□ -0.21
TfamP40630 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.71□□□□□ -0.21
TfamP40630 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
TfamP40630 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
TfamP40630 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TfamP40630 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TfamP40630 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms