Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LdlrP35951 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LdlrP35951 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.11□□□□□ -0.15
LdlrP35951 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.11□□□□□ -0.15
LdlrP35951 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LdlrP35951 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LdlrP35951 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.11□□□□□ -0.15
LdlrP35951 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LdlrP35951 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LdlrP35951 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LdlrP35951 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.1□□□□□ -0.15
LdlrP35951 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LdlrP35951 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LdlrP35951 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LdlrP35951 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LdlrP35951 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LdlrP35951 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LdlrP35951 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LdlrP35951 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.1□□□□□ -0.15
LdlrP35951 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.1□□□□□ -0.15
LdlrP35951 Gm16026-204ENSMUST00000162652 683 ntBASIC14.1□□□□□ -0.15
LdlrP35951 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.1□□□□□ -0.15
LdlrP35951 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.1□□□□□ -0.15
LdlrP35951 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.1□□□□□ -0.15
LdlrP35951 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LdlrP35951 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.1□□□□□ -0.15
LdlrP35951 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.1□□□□□ -0.15
LdlrP35951 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LdlrP35951 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LdlrP35951 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LdlrP35951 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LdlrP35951 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LdlrP35951 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LdlrP35951 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LdlrP35951 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LdlrP35951 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LdlrP35951 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
LdlrP35951 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
LdlrP35951 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.09□□□□□ -0.15
LdlrP35951 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.09□□□□□ -0.15
LdlrP35951 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.09□□□□□ -0.15
LdlrP35951 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LdlrP35951 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
LdlrP35951 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LdlrP35951 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LdlrP35951 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LdlrP35951 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
LdlrP35951 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LdlrP35951 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LdlrP35951 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
LdlrP35951 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LdlrP35951 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LdlrP35951 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LdlrP35951 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
LdlrP35951 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.08□□□□□ -0.16
LdlrP35951 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
LdlrP35951 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
LdlrP35951 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LdlrP35951 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LdlrP35951 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms