Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nedd8P29595 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nedd8P29595 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.08□□□□□ -0.32
Nedd8P29595 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nedd8P29595 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Nedd8P29595 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Nedd8P29595 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Nedd8P29595 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.07□□□□□ -0.32
Nedd8P29595 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.07□□□□□ -0.32
Nedd8P29595 Gm7506-201ENSMUST00000207758 815 ntBASIC13.07□□□□□ -0.32
Nedd8P29595 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.07□□□□□ -0.32
Nedd8P29595 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nedd8P29595 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nedd8P29595 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nedd8P29595 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.06□□□□□ -0.32
Nedd8P29595 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nedd8P29595 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Nedd8P29595 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.06□□□□□ -0.32
Nedd8P29595 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Gm25925-201ENSMUST00000158314 306 ntBASIC13.06□□□□□ -0.32
Nedd8P29595 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.06□□□□□ -0.32
Nedd8P29595 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.06□□□□□ -0.32
Nedd8P29595 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.06□□□□□ -0.32
Nedd8P29595 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nedd8P29595 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.06□□□□□ -0.32
Nedd8P29595 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nedd8P29595 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.06□□□□□ -0.32
Nedd8P29595 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nedd8P29595 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nedd8P29595 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nedd8P29595 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nedd8P29595 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.05□□□□□ -0.32
Nedd8P29595 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nedd8P29595 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Nedd8P29595 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nedd8P29595 Gm8749-201ENSMUST00000117737 331 ntBASIC13.05□□□□□ -0.32
Nedd8P29595 Gm15794-201ENSMUST00000120182 631 ntBASIC13.05□□□□□ -0.32
Nedd8P29595 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.05□□□□□ -0.32
Nedd8P29595 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Gm10812-201ENSMUST00000099864 546 ntBASIC13.05□□□□□ -0.32
Nedd8P29595 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nedd8P29595 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nedd8P29595 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms