Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.23□□□□□ -0.13
RxrbP28704 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.23□□□□□ -0.13
RxrbP28704 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RxrbP28704 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RxrbP28704 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RxrbP28704 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RxrbP28704 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.22□□□□□ -0.13
RxrbP28704 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
RxrbP28704 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RxrbP28704 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.22□□□□□ -0.13
RxrbP28704 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Gm13884-201ENSMUST00000118103 829 ntBASIC14.22□□□□□ -0.13
RxrbP28704 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.22□□□□□ -0.13
RxrbP28704 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.22□□□□□ -0.13
RxrbP28704 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.22□□□□□ -0.13
RxrbP28704 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.22□□□□□ -0.13
RxrbP28704 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RxrbP28704 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RxrbP28704 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RxrbP28704 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.21□□□□□ -0.13
RxrbP28704 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RxrbP28704 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RxrbP28704 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RxrbP28704 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
RxrbP28704 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RxrbP28704 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RxrbP28704 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RxrbP28704 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RxrbP28704 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RxrbP28704 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RxrbP28704 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RxrbP28704 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.21□□□□□ -0.13
RxrbP28704 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.21□□□□□ -0.13
RxrbP28704 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
RxrbP28704 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.21□□□□□ -0.13
RxrbP28704 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RxrbP28704 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.21□□□□□ -0.13
RxrbP28704 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RxrbP28704 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RxrbP28704 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.21□□□□□ -0.13
RxrbP28704 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RxrbP28704 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RxrbP28704 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RxrbP28704 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.21□□□□□ -0.13
RxrbP28704 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RxrbP28704 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.21□□□□□ -0.13
RxrbP28704 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RxrbP28704 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RxrbP28704 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RxrbP28704 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
RxrbP28704 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RxrbP28704 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RxrbP28704 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RxrbP28704 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
RxrbP28704 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RxrbP28704 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RxrbP28704 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RxrbP28704 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.2□□□□□ -0.14
RxrbP28704 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
RxrbP28704 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RxrbP28704 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms