Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Irf8P23611 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
Irf8P23611 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Irf8P23611 Gm12585-201ENSMUST00000117307 290 ntBASIC15.27■□□□□ 0.04
Irf8P23611 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Irf8P23611 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Irf8P23611 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Irf8P23611 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Irf8P23611 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Irf8P23611 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Irf8P23611 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Irf8P23611 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Irf8P23611 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
Irf8P23611 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Irf8P23611 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Irf8P23611 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Irf8P23611 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Irf8P23611 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Irf8P23611 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Irf8P23611 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Irf8P23611 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Irf8P23611 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Irf8P23611 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Irf8P23611 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Irf8P23611 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.26■□□□□ 0.03
Irf8P23611 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.26■□□□□ 0.03
Irf8P23611 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Irf8P23611 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.26■□□□□ 0.03
Irf8P23611 Gm15393-201ENSMUST00000120499 219 ntBASIC15.26■□□□□ 0.03
Irf8P23611 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.26■□□□□ 0.03
Irf8P23611 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.26■□□□□ 0.03
Irf8P23611 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Gm21470-201ENSMUST00000187680 696 ntBASIC15.26■□□□□ 0.03
Irf8P23611 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.26■□□□□ 0.03
Irf8P23611 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.26■□□□□ 0.03
Irf8P23611 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.26■□□□□ 0.03
Irf8P23611 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Irf8P23611 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Irf8P23611 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Irf8P23611 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Irf8P23611 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Irf8P23611 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Irf8P23611 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.25■□□□□ 0.03
Irf8P23611 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Irf8P23611 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.25■□□□□ 0.03
Irf8P23611 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Irf8P23611 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Irf8P23611 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Irf8P23611 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Irf8P23611 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Irf8P23611 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Irf8P23611 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Irf8P23611 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Irf8P23611 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms