Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.24□□□□□ -0.29
Clk1P22518 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.24□□□□□ -0.29
Clk1P22518 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Gm2213-201ENSMUST00000197485 688 ntBASIC13.24□□□□□ -0.29
Clk1P22518 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clk1P22518 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.24□□□□□ -0.29
Clk1P22518 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.24□□□□□ -0.29
Clk1P22518 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Clk1P22518 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Clk1P22518 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.23□□□□□ -0.29
Clk1P22518 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.23□□□□□ -0.29
Clk1P22518 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.23□□□□□ -0.29
Clk1P22518 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Clk1P22518 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Clk1P22518 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.23□□□□□ -0.29
Clk1P22518 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.23□□□□□ -0.29
Clk1P22518 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Clk1P22518 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.23□□□□□ -0.29
Clk1P22518 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.23□□□□□ -0.29
Clk1P22518 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.23□□□□□ -0.29
Clk1P22518 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Gm25911-201ENSMUST00000157621 56 ntBASIC13.23□□□□□ -0.29
Clk1P22518 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.23□□□□□ -0.29
Clk1P22518 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.23□□□□□ -0.29
Clk1P22518 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Clk1P22518 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Clk1P22518 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Clk1P22518 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Clk1P22518 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Clk1P22518 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clk1P22518 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Clk1P22518 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.22□□□□□ -0.29
Clk1P22518 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Clk1P22518 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
Clk1P22518 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.22□□□□□ -0.29
Clk1P22518 Gm2810-201ENSMUST00000118681 990 ntBASIC13.22□□□□□ -0.29
Clk1P22518 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.22□□□□□ -0.29
Clk1P22518 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Gm27920-201ENSMUST00000183953 96 ntBASIC13.22□□□□□ -0.29
Clk1P22518 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.22□□□□□ -0.29
Clk1P22518 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
Clk1P22518 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clk1P22518 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Clk1P22518 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms