Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Gm12849-201ENSMUST00000120013 739 ntBASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Gm14928-201ENSMUST00000120198 477 ntBASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf9P20334 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Gm45696-201ENSMUST00000212088 985 ntBASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfrsf9P20334 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf9P20334 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf9P20334 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf9P20334 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
Tnfrsf9P20334 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.65□□□□□ -0.55
Tnfrsf9P20334 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf9P20334 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
Tnfrsf9P20334 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf9P20334 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf9P20334 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf9P20334 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf9P20334 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf9P20334 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf9P20334 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf9P20334 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfrsf9P20334 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Efs-202ENSMUST00000227037 2540 ntBASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfrsf9P20334 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms