Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
VimP20152 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.37□□□□□ -0.11
VimP20152 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
VimP20152 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.37□□□□□ -0.11
VimP20152 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.37□□□□□ -0.11
VimP20152 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.37□□□□□ -0.11
VimP20152 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.37□□□□□ -0.11
VimP20152 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
VimP20152 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
VimP20152 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
VimP20152 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
VimP20152 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VimP20152 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.36□□□□□ -0.11
VimP20152 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.36□□□□□ -0.11
VimP20152 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
VimP20152 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.36□□□□□ -0.11
VimP20152 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
VimP20152 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.36□□□□□ -0.11
VimP20152 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.36□□□□□ -0.11
VimP20152 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.36□□□□□ -0.11
VimP20152 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
VimP20152 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.36□□□□□ -0.11
VimP20152 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VimP20152 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VimP20152 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VimP20152 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VimP20152 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VimP20152 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VimP20152 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VimP20152 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VimP20152 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VimP20152 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VimP20152 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VimP20152 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VimP20152 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VimP20152 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VimP20152 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
VimP20152 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
VimP20152 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VimP20152 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
VimP20152 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VimP20152 Gm22240-201ENSMUST00000175225 82 ntBASIC14.35□□□□□ -0.11
VimP20152 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
VimP20152 Gm27867-201ENSMUST00000184778 125 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms