Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TnfP06804 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TnfP06804 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.01□□□□□ -0.01
TnfP06804 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.01□□□□□ -0.01
TnfP06804 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15□□□□□ -0.01
TnfP06804 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TnfP06804 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TnfP06804 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15□□□□□ -0.01
TnfP06804 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TnfP06804 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15□□□□□ -0.01
TnfP06804 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TnfP06804 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TnfP06804 Gm18018-201ENSMUST00000198273 408 ntBASIC15□□□□□ -0.01
TnfP06804 AC154687.2-201ENSMUST00000223853 640 ntBASIC15□□□□□ -0.01
TnfP06804 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TnfP06804 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TnfP06804 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TnfP06804 Gm15823-201ENSMUST00000064305 670 ntBASIC15□□□□□ -0.01
TnfP06804 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TnfP06804 Gm42690-201ENSMUST00000197921 1836 ntBASIC15□□□□□ -0.01
TnfP06804 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TnfP06804 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
TnfP06804 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TnfP06804 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15□□□□□ -0.01
TnfP06804 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TnfP06804 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TnfP06804 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
TnfP06804 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TnfP06804 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TnfP06804 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TnfP06804 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.99□□□□□ -0.01
TnfP06804 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.99□□□□□ -0.01
TnfP06804 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TnfP06804 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.99□□□□□ -0.01
TnfP06804 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TnfP06804 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TnfP06804 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TnfP06804 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TnfP06804 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TnfP06804 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TnfP06804 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TnfP06804 Gm12490-201ENSMUST00000120255 560 ntBASIC14.99□□□□□ -0.01
TnfP06804 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.99□□□□□ -0.01
TnfP06804 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TnfP06804 Mir6392-201ENSMUST00000184924 108 ntBASIC14.99□□□□□ -0.01
TnfP06804 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.99□□□□□ -0.01
TnfP06804 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TnfP06804 Gm45668-201ENSMUST00000211271 493 ntBASIC14.99□□□□□ -0.01
TnfP06804 Gm5425-201ENSMUST00000214125 459 ntBASIC14.99□□□□□ -0.01
TnfP06804 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.99□□□□□ -0.01
TnfP06804 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TnfP06804 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TnfP06804 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TnfP06804 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.99□□□□□ -0.01
TnfP06804 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TnfP06804 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TnfP06804 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TnfP06804 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.99□□□□□ -0.01
TnfP06804 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.99□□□□□ -0.01
TnfP06804 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TnfP06804 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TnfP06804 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TnfP06804 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TnfP06804 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TnfP06804 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TnfP06804 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TnfP06804 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TnfP06804 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TnfP06804 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.98□□□□□ -0.01
TnfP06804 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.98□□□□□ -0.01
TnfP06804 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.98□□□□□ -0.01
TnfP06804 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
TnfP06804 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.98□□□□□ -0.01
TnfP06804 Gm12091-201ENSMUST00000146791 830 ntBASIC14.98□□□□□ -0.01
TnfP06804 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.98□□□□□ -0.01
TnfP06804 Gm8515-201ENSMUST00000194852 576 ntBASIC14.98□□□□□ -0.01
TnfP06804 Gm6745-201ENSMUST00000199216 526 ntBASIC14.98□□□□□ -0.01
TnfP06804 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.98□□□□□ -0.01
TnfP06804 Gm7653-201ENSMUST00000214567 508 ntBASIC14.98□□□□□ -0.01
TnfP06804 Gm18624-201ENSMUST00000220966 658 ntBASIC14.98□□□□□ -0.01
TnfP06804 Gm6180-201ENSMUST00000065243 498 ntBASIC14.98□□□□□ -0.01
TnfP06804 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TnfP06804 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.98□□□□□ -0.01
TnfP06804 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TnfP06804 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TnfP06804 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms