Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CfdP03953 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CfdP03953 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CfdP03953 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CfdP03953 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CfdP03953 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CfdP03953 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CfdP03953 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CfdP03953 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CfdP03953 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CfdP03953 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.85□□□□□ -0.51
CfdP03953 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CfdP03953 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CfdP03953 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
CfdP03953 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CfdP03953 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
CfdP03953 Gm37500-201ENSMUST00000192059 1443 ntBASIC11.85□□□□□ -0.51
CfdP03953 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CfdP03953 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CfdP03953 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CfdP03953 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CfdP03953 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CfdP03953 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.85□□□□□ -0.51
CfdP03953 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CfdP03953 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.84□□□□□ -0.51
CfdP03953 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CfdP03953 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.84□□□□□ -0.51
CfdP03953 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
CfdP03953 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CfdP03953 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.84□□□□□ -0.51
CfdP03953 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.84□□□□□ -0.51
CfdP03953 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.84□□□□□ -0.51
CfdP03953 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.84□□□□□ -0.51
CfdP03953 Gm45167-201ENSMUST00000208007 322 ntBASIC11.84□□□□□ -0.51
CfdP03953 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.84□□□□□ -0.51
CfdP03953 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.84□□□□□ -0.51
CfdP03953 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.84□□□□□ -0.51
CfdP03953 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CfdP03953 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
CfdP03953 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.83□□□□□ -0.51
CfdP03953 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.83□□□□□ -0.51
CfdP03953 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CfdP03953 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CfdP03953 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
CfdP03953 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CfdP03953 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CfdP03953 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
CfdP03953 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CfdP03953 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CfdP03953 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CfdP03953 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CfdP03953 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CfdP03953 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CfdP03953 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CfdP03953 Gm11764-201ENSMUST00000120221 623 ntBASIC11.83□□□□□ -0.52
CfdP03953 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CfdP03953 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CfdP03953 Gm44357-201ENSMUST00000195897 142 ntBASIC11.83□□□□□ -0.52
CfdP03953 Gm19658-201ENSMUST00000196231 138 ntBASIC11.83□□□□□ -0.52
CfdP03953 Gm44367-201ENSMUST00000196836 138 ntBASIC11.83□□□□□ -0.52
CfdP03953 Gm44350-201ENSMUST00000197197 138 ntBASIC11.83□□□□□ -0.52
CfdP03953 Gm44390-201ENSMUST00000197533 144 ntBASIC11.83□□□□□ -0.52
CfdP03953 Gm44313-201ENSMUST00000198018 138 ntBASIC11.83□□□□□ -0.52
CfdP03953 Gm44486-201ENSMUST00000198508 138 ntBASIC11.83□□□□□ -0.52
CfdP03953 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CfdP03953 Gm44314-201ENSMUST00000199263 138 ntBASIC11.83□□□□□ -0.52
CfdP03953 Gm44394-201ENSMUST00000199558 138 ntBASIC11.83□□□□□ -0.52
CfdP03953 Gm44484-201ENSMUST00000199873 138 ntBASIC11.83□□□□□ -0.52
CfdP03953 Gm44466-201ENSMUST00000200264 138 ntBASIC11.83□□□□□ -0.52
CfdP03953 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CfdP03953 Gm44359-201ENSMUST00000200671 138 ntBASIC11.83□□□□□ -0.52
CfdP03953 AC121577.1-201ENSMUST00000227302 707 ntBASIC11.83□□□□□ -0.52
CfdP03953 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CfdP03953 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CfdP03953 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CfdP03953 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CfdP03953 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CfdP03953 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CfdP03953 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms