Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.9□□□□□ -0.5
Hoxa3P02831 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa3P02831 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Hoxa3P02831 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
Hoxa3P02831 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hoxa3P02831 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hoxa3P02831 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hoxa3P02831 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hoxa3P02831 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hoxa3P02831 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Gm6222-201ENSMUST00000120787 396 ntBASIC11.89□□□□□ -0.51
Hoxa3P02831 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Hoxa3P02831 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.89□□□□□ -0.51
Hoxa3P02831 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.89□□□□□ -0.51
Hoxa3P02831 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.89□□□□□ -0.51
Hoxa3P02831 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Gm16476-201ENSMUST00000221544 139 ntBASIC11.89□□□□□ -0.51
Hoxa3P02831 Dupd1-202ENSMUST00000224735 548 ntBASIC11.89□□□□□ -0.51
Hoxa3P02831 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.89□□□□□ -0.51
Hoxa3P02831 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hoxa3P02831 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Hoxa3P02831 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa3P02831 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.88□□□□□ -0.51
Hoxa3P02831 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Gm14719-201ENSMUST00000121891 340 ntBASIC11.88□□□□□ -0.51
Hoxa3P02831 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Hoxa3P02831 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.88□□□□□ -0.51
Hoxa3P02831 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.88□□□□□ -0.51
Hoxa3P02831 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Hoxa3P02831 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hoxa3P02831 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Hoxa3P02831 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Hoxa3P02831 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxa3P02831 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.87□□□□□ -0.51
Hoxa3P02831 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.87□□□□□ -0.51
Hoxa3P02831 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hoxa3P02831 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Hoxa3P02831 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxa3P02831 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms