Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col4a1P02463 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Col4a1P02463 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC17.1■□□□□ 0.33
Col4a1P02463 Gm38002-201ENSMUST00000193255 180 ntBASIC17.1■□□□□ 0.33
Col4a1P02463 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Gm45841-201ENSMUST00000207700 164 ntBASIC17.1■□□□□ 0.33
Col4a1P02463 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.1■□□□□ 0.33
Col4a1P02463 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a1P02463 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col4a1P02463 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a1P02463 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a1P02463 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a1P02463 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a1P02463 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC17.09■□□□□ 0.33
Col4a1P02463 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a1P02463 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a1P02463 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a1P02463 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a1P02463 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a1P02463 Gm15371-201ENSMUST00000117057 784 ntBASIC17.09■□□□□ 0.33
Col4a1P02463 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC17.09■□□□□ 0.33
Col4a1P02463 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.09■□□□□ 0.33
Col4a1P02463 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a1P02463 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a1P02463 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a1P02463 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC17.09■□□□□ 0.33
Col4a1P02463 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.09■□□□□ 0.33
Col4a1P02463 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.09■□□□□ 0.33
Col4a1P02463 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.09■□□□□ 0.33
Col4a1P02463 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.09■□□□□ 0.33
Col4a1P02463 AC131997.1-201ENSMUST00000228611 1229 ntBASIC17.09■□□□□ 0.33
Col4a1P02463 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a1P02463 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a1P02463 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC17.09■□□□□ 0.33
Col4a1P02463 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col4a1P02463 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col4a1P02463 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col4a1P02463 Mir686-201ENSMUST00000102174 109 ntBASIC17.08■□□□□ 0.32
Col4a1P02463 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a1P02463 Gm14350-201ENSMUST00000116642 640 ntBASIC17.08■□□□□ 0.32
Col4a1P02463 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.08■□□□□ 0.32
Col4a1P02463 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a1P02463 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a1P02463 Gm13123-201ENSMUST00000122173 492 ntBASIC17.08■□□□□ 0.32
Col4a1P02463 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a1P02463 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
Col4a1P02463 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a1P02463 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC17.08■□□□□ 0.32
Col4a1P02463 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a1P02463 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a1P02463 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.08■□□□□ 0.32
Col4a1P02463 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Col4a1P02463 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a1P02463 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a1P02463 Gm7399-201ENSMUST00000032395 858 ntBASIC17.08■□□□□ 0.32
Col4a1P02463 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a1P02463 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.08■□□□□ 0.32
Col4a1P02463 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a1P02463 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a1P02463 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.08■□□□□ 0.32
Col4a1P02463 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a1P02463 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Col4a1P02463 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a1P02463 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a1P02463 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a1P02463 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a1P02463 Gm13886-201ENSMUST00000117876 1183 ntBASIC17.07■□□□□ 0.32
Col4a1P02463 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.07■□□□□ 0.32
Col4a1P02463 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a1P02463 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Col4a1P02463 Gm42550-201ENSMUST00000201553 960 ntBASIC17.07■□□□□ 0.32
Col4a1P02463 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC17.07■□□□□ 0.32
Col4a1P02463 Gm44064-201ENSMUST00000204964 1087 ntBASIC17.07■□□□□ 0.32
Col4a1P02463 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a1P02463 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a1P02463 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a1P02463 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a1P02463 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a1P02463 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a1P02463 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a1P02463 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.07■□□□□ 0.32
Col4a1P02463 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a1P02463 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a1P02463 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a1P02463 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a1P02463 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a1P02463 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Col4a1P02463 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms