Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
P01852 Gm27618-201ENSMUST00000183671 60 ntBASIC12.98□□□□□ -0.33
P01852 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
P01852 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
P01852 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
P01852 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.98□□□□□ -0.33
P01852 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.98□□□□□ -0.33
P01852 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
P01852 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P01852 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.97□□□□□ -0.33
P01852 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.97□□□□□ -0.33
P01852 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
P01852 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
P01852 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Gm24543-201ENSMUST00000103867 82 ntBASIC12.97□□□□□ -0.33
P01852 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.97□□□□□ -0.33
P01852 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.97□□□□□ -0.33
P01852 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.97□□□□□ -0.33
P01852 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.97□□□□□ -0.33
P01852 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.97□□□□□ -0.33
P01852 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
P01852 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.97□□□□□ -0.33
P01852 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
P01852 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.97□□□□□ -0.33
P01852 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
P01852 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P01852 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P01852 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01852 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01852 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01852 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P01852 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P01852 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01852 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01852 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.96□□□□□ -0.33
P01852 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01852 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P01852 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.96□□□□□ -0.33
P01852 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01852 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01852 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
P01852 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P01852 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
P01852 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01852 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.96□□□□□ -0.33
P01852 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
P01852 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.96□□□□□ -0.33
P01852 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
P01852 Gm27631-201ENSMUST00000184163 466 ntBASIC12.96□□□□□ -0.33
P01852 AA619741-201ENSMUST00000195095 646 ntBASIC12.96□□□□□ -0.33
P01852 Gm45453-201ENSMUST00000211758 853 ntBASIC12.96□□□□□ -0.33
P01852 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.96□□□□□ -0.33
P01852 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.96□□□□□ -0.33
P01852 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.96□□□□□ -0.33
P01852 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01852 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
P01852 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01852 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01852 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01852 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01852 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01852 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01852 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
P01852 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms